Looks like Job objects are being created a little bit too soon, need to add a pause or sleep to give the jobs some time to start being run and log files generated before initializing. Alternatively, reconfigure initialization & log file checking.
[INFO ] Creating new sns analysis in dir /ifs/data/molecpathlab/NGS580_WES/171116_NB501073_0027_AHT5M2BGX3/results_2017-11-24_14-55-05
[WARNING ] Log file does not appear to exist: /ifs/data/molecpathlab/NGS580_WES/171116_NB501073_0027_AHT5M2BGX3/results_2017-11-24_14-55-05/logs-qsub/sns.wes.SC-SERACARE.o4127208
Looks like
Jobobjects are being created a little bit too soon, need to add a pause orsleepto give the jobs some time to start being run and log files generated before initializing. Alternatively, reconfigure initialization & log file checking.