Small bug in seacon/normalizer.py

NabaviLab / SEACON

A tool for allele-specific copy number profiling.

GNU General Public License v3.0

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Closed xikanfeng2 closed 1 month ago

xikanfeng2 commented 2 months ago

The line 59 of seacon/normalizer.py should be

        readcount_df[b] = readcount_df[b] / bin_lambdas[b]

rather than

        readcount_df[b] = readcount_df[b] / y[b]

The variable y is not defined.

samsonweiner commented 1 month ago

Thank you very much for finding this! I've updated the code.