Speed up Uniprot Fetch by getting all information from the same record fetch

[knaegle]

Is your feature request related to a problem? Please describe. Currently, CoDAC.Uniprot fetch to uniprot information takes a very long time as the architecture is setup to do a new URL fetch/query for each piece of information.

Describe the solution you'd like Fetch all relevant information from the Uniprot Record at the time of a record fetch.

Tasks

Include specific tasks in the order they need to be done in. Include links to specific lines of code where the task should happen at.

• [x] Collapse all information grabs for the Uniprot object into one fetch
• [x] Replace the Domains and domain architecture fields with new code that mixes InterPro/UniProt decision
• [x] Instead of fetching records again for PDB IDs, add a column to the makeRefFile that is PDB IDs, ID values that are semicolon separated. We can parse these then later without fetching Uniprot records again for PDB parsing.

[knaegle]

Time is now halved by changes to a single fetch then parsing from that one fetch.

[knaegle]

Now have complete InterPro, which is more inclusive, no need to integrate UniProt and Interpro.