commentary on normalization approaches

Nanostring-Biostats / CosMx-Analysis-Scratch-Space

This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of topics discussed when analyzing single-cell spatial data.

https://nanostring-biostats.github.io/CosMx-Analysis-Scratch-Space/

Other

34 stars 4 forks source link

commentary on normalization approaches #49

Closed patrickjdanaher closed 4 months ago

patrickjdanaher commented 5 months ago

what approaches exist
which do we recommend
when is normalized data useful? do any analyses benefit from a particular kind of normalization?

patrickjdanaher commented 4 months ago

Added to normalization & QC post.