Closed lidanwu closed 5 months ago
@crwilliams11 , I added in some more notes on FastReseg post based on our conversation in this PR. Hopefully, this is more clear now.
@crwilliams11 , thank you for the careful review and nice suggestions. I have incorporated them. Please take a look and let me know if needs any further edits
Contents in this PR:
anndata
object (.h5ad
file) from either a Seurat object or the basic data files exported by AtoMx SIP.anndata
object with interactive viewer.The conversion of AtoMx exported results into
.h5ad
file would facilitate seamless integration into Python-based single-cell analysis workflows.To run
python
code inquarto
inR studio
, you would need to set the reticulate package correctly. You can do that when you start a new R session fresh.