This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of topics discussed when analyzing single-cell spatial data.
Adding a post pointing out insitucor's existence AND making the AtoMx custom module (beta version) available.
No need to review code - it was reviewed as part of an earlier project. Just need a 2nd set of eyes on the very short post.