default values - Githubissues

Nanostring-Biostats / GeoDiff

GeoDiff, an R package for count generating models for analyzing Geomx RNA data. Note that this version of the package is still under development, undergoing submission process to Bioconductor 3.14 release and still needs to complete NanoString internal verification process.

MIT License

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default values #9

Closed maddygriz closed 2 years ago

maddygriz commented 2 years ago

fitNBthDE

[x] prior_type = c("equal", "contrast") should be changed to prior_type = c("contrast", "equal")
[x] preci2 needs a default value
[x] preci1con needs a default value

fitNBthmDE

[ ] preci1 needs a default value
[x] preci2 needs a default value
[x] threshold_mean needs default value

fitPoisthNorm

[x] preci2 needs a default value

zhiiiyang commented 2 years ago

@maddygriz, preci1 is from another fitted model and can't be pre-specified by a simple fixed number or calculation.