Open jonoave opened 1 month ago
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Hello,
I’m trying tor run the analysis on GeoMx data following the guide here: https://bioconductor.org/packages/3.14/workflows/vignettes/GeoMxWorkflows/inst/doc/GeomxTools_RNA-NGS_Analysis.html#
I checked out GitHub and found some replies suggesting to email the support.
I’m having some issues with this particular step at 4.3: Create Gene_level Counts.
Trying to run aggregateCounts return this error message:
Some information on the geoMx_data_QC object:
Packages used:
Thanks in advance for any help or suggestions!