Semi supervised InSituType doesn't stop running

[yaelAmitay]

Hi,

I've been applying the semi-supervised InSituType method to my data, following the examples, but it's been running for hours without stopping. How much time is appropriate for datasets of around 100K cells?

The code I'm using:

res = insitutype(counts = counts,
                 neg = annot$negmean,
                 n_clusts = nclust$best_clust_number,
                 reference_profiles = ioprofiles)

Am I missing something?

Thanks!