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Nanostring-Biostats / NanoStringNCTools

Tools for NanoString Technologies nCounter Technology for reading RCC files into an ExpressionSet derived object, QC and normalization.
MIT License
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pData and sData #31

Closed Hanxi-002 closed 1 year ago

Hanxi-002 commented 1 year ago

I'm going through the GeoMX tutorial on bioconductor. The tutorial utilizes/mentions pData and sData extensively. I wasn't able to figure out what these functions do through google searches. Could you point me to the right direction please? Thanks a lot!

maddygriz commented 1 year ago

Hi Hanxi,

NCTools and GeomxTools are based on the ExpressionSet class. These functions are ExpressionSet native functions and those instructions can be found in the GeoMxSet Object Overview section of the GeoMx workflow vignette.

Hope that helps, Maddy