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Nanostring-Biostats / NanoStringNCTools

Tools for NanoString Technologies nCounter Technology for reading RCC files into an ExpressionSet derived object, QC and normalization.
MIT License
9 stars 6 forks source link

Background Correction? #36

Open GCAT01 opened 8 months ago

GCAT01 commented 8 months ago

I am currently using this package with a dataset that has been taken through the nSolver software to see if i can get the same answers as doing the entire thing in R would greatly improve our workflow. However, I do not see an option in this package for background correction. I see there are functions for QC flagging and normalization but no background correction (thresholding or subtraction). Are these not included in this package or am I missing something? I am using version 1.8.0

github-actions[bot] commented 8 months ago

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