search

Nanostring-Biostats / NanoStringNCTools

Tools for NanoString Technologies nCounter Technology for reading RCC files into an ExpressionSet derived object, QC and normalization.
MIT License
9 stars 6 forks source link

Background Correction? #36

Open GCAT01 opened 7 months ago

GCAT01 commented 7 months ago

I am currently using this package with a dataset that has been taken through the nSolver software to see if i can get the same answers as doing the entire thing in R would greatly improve our workflow. However, I do not see an option in this package for background correction. I see there are functions for QC flagging and normalization but no background correction (thresholding or subtraction). Are these not included in this package or am I missing something? I am using version 1.8.0

github-actions[bot] commented 7 months ago

Thank you for contacting us about our tools! To receive assistance, kindly email support@nanostring.com with detailed information about your issue. If applicable, attach a screenshot of any encountered errors and include a copy of the modified script in Notepad. Our customer support team will help facilitate a review and resolution of the issue.

Thank you for choosing NanoString, NanoString Dev Team