Allow gene matching by ID

Nanostring-Biostats / SpatialDecon

The SpatialDecon library implements the SpatialDecon algorithm for mixed cell deconvolution in spatial gene expression datasets. (This algorithm also works in bulk expression profiling data.)

MIT License

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Allow gene matching by ID #25

Open maddygriz opened 2 years ago

maddygriz commented 2 years ago

Genes are matched between profile matrix and GeoMx matrices by gene name, it would be more accurate if matched by gene ID.

Some probes hit multiple genes so the average of those genes in the matrix can be compared to GeoMx count matrix