where is ukb_sqc_v2.txt file located?

Nealelab / UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

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Closed montenegrina closed 4 years ago

montenegrina commented 4 years ago

Hello,

can you please tell me from where and how did you download ukb_sqc_v2.txt file?

Thanks Ana

howrigan commented 4 years ago

Hi Ana,

This file is provided in the UK Biobank Genotyping and Imputation Data Release - this requires an approved application by UK Biobank in order to access the data release. You can find details about the Data Release in this FAQ: http://www.ukbiobank.ac.uk/wp-content/uploads/2018/03/UKB-Genotyping-and-Imputation-Data-Release-FAQ-v3-2-1.pdf

best, Dan

davidenoma commented 5 months ago

It is located in /Genotyp_Results/Genotye_Calls/

the same folder with you .bim and .bed files