Closed TBDerm closed 8 months ago
Thanks for the feedback. @TBDerm It's possible to have adjusted p-value or p-value the same. It's really typically when you have a comparison not really seeing difference like this case. I don't think that's really an issue of the program. Thanks.
Hi all, I have recently uploaded a DIA intensity proteins dataset to fragpipe analyst, to get fold change and p-values. Contrary to other datasets I have analysed previously, this one is producing multiple identical p-values, so that when I make a volcano plot, there are several plateaus of points. Could anyone provide an explanation for this? Volcano plot is attached. Thanks!