Difficulty in analyzing DIA data using DIA-NN

Nesvilab / FragPipe

A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data

http://fragpipe.nesvilab.org

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Difficulty in analyzing DIA data using DIA-NN #1656

Open RonenGabizon opened 3 days ago

RonenGabizon commented 3 days ago

- Upload your log file I am trying to analyze DIA data but the analysis crashes before running DIA-NN for quantification due to an issue with the spectral library.

- Describe the issue or question:

log_2024-07-02_09-17-38.txt

fcyu commented 3 days ago

Have you configured Python, installed EasyPQP, and enabled the spectral library building module?

Thanks,

Fengchao