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Nesvilab / FragPipe

A cross-platform proteomics data analysis suite
http://fragpipe.nesvilab.org
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#Philosopher issue: "Cannot decode packed binary" #337

Closed DianaSamodova closed 3 years ago

DianaSamodova commented 3 years ago

Dear Alexey, I am trying to run TIMS Tof data with the FragPipe, however, getting the same error again again: "FATA[16:01:37] Cannot decode packed binary. XML syntax error on line 1531: invalid character entity &additional (no semicolon)". Can you, please, help with this? Thank you in advance. Kind regards, Diana

fcyu commented 3 years ago

Hi @prvst ,

This error should be from Philosopher. Could you take a look when you have time?

Best,

Fengchao

anesvi commented 3 years ago

Can you send us the full log? You can email me (nesvi at med.umich.edu) and I will discuss with Felipe @prvst

From: Fengchao @.> Sent: Wednesday, March 24, 2021 8:43 AM To: Nesvilab/FragPipe @.> Cc: Subscribed @.***> Subject: Re: [Nesvilab/FragPipe] #Philosopher issue: "Cannot decode packed binary" (#337)

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Hi @prvsthttps://github.com/prvst ,

This error should be from Philosopher. Could you take a look when you have time?

Best,

Fengchao

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