TMT10-plex error - Githubissues

rajeshksoni11 commented 3 years ago

12:55:32 ERROR: Error delivering events through the bus java.lang.ArrayIndexOutOfBoundsException: Index 1 out of bounds for length 1 at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel.parseTmtAnnotationFile(TmtiPanel.java:616) at com.dmtavt.fragpipe.cmd.CmdTmtIntegrator.configure(CmdTmtIntegrator.java:114) at com.dmtavt.fragpipe.FragpipeRun.lambda$configureTaskGraph$43(FragpipeRun.java:1035) at com.dmtavt.fragpipe.FragpipeRun.configureTaskGraph(FragpipeRun.java:1247) at com.dmtavt.fragpipe.FragpipeRun.run(FragpipeRun.java:199) at com.dmtavt.fragpipe.tabs.TabRun.on(TabRun.java:153) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source) at java.base/java.lang.reflect.Method.invoke(Unknown Source) at org.greenrobot.eventbus.EventBus.invokeSubscriber(EventBus.java:510) at org.greenrobot.eventbus.EventBus.invokeSubscriber(EventBus.java:504) at org.greenrobot.eventbus.AsyncPoster.run(AsyncPoster.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source)

log_2021-09-22_12-58-10.txt

Do you have example annotation file for tmt-10plex?

Best, Rajesh

fcyu commented 3 years ago

You can create one and edit it in FragPipe:

Best,

Fengchao

rajeshksoni11 commented 3 years ago

Hi, When i create or edit, here is the errors:

java.lang.ArrayIndexOutOfBoundsException: Index 1 out of bounds for length 1 at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel.parseTmtAnnotationFile(TmtiPanel.java:616) at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel.actionEditCreate(TmtiPanel.java:858) at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel$2.actionPerformed(TmtiPanel.java:248) at com.github.chhh.utils.swing.renderers.ButtonColumn.actionPerformed(ButtonColumn.java:195) at java.desktop/javax.swing.AbstractButton.fireActionPerformed(Unknown Source) at java.desktop/javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source) at java.desktop/javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source) at java.desktop/javax.swing.DefaultButtonModel.setPressed(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source) at java.desktop/java.awt.Component.processMouseEvent(Unknown Source) at java.desktop/javax.swing.JComponent.processMouseEvent(Unknown Source) at java.desktop/java.awt.Component.processEvent(Unknown Source) at java.desktop/java.awt.Container.processEvent(Unknown Source) at java.desktop/java.awt.Component.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicTableUI$Handler.repostEvent(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicTableUI$Handler.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.Component.processMouseEvent(Unknown Source) at java.desktop/javax.swing.JComponent.processMouseEvent(Unknown Source) at java.desktop/java.awt.Component.processEvent(Unknown Source) at java.desktop/java.awt.Container.processEvent(Unknown Source) at java.desktop/java.awt.Component.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.processMouseEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.dispatchEvent(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Window.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/java.awt.EventQueue.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.EventQueue$4.run(Unknown Source) at java.desktop/java.awt.EventQueue$4.run(Unknown Source) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.desktop/java.awt.EventQueue$5.run(Unknown Source) at java.desktop/java.awt.EventQueue$5.run(Unknown Source) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.desktop/java.awt.EventQueue.dispatchEvent(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.desktop/java.awt.EventDispatchThread.run(Unknown Source)

From: Fengchao @.> Sent: Wednesday, September 22, 2021 1:02 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

You can create one and edit it in FragPipe: [image]https://urldefense.proofpoint.com/v2/url?u=https-3A__user-2Dimages.githubusercontent.com_6926299_134388755-2D5df105fa-2Db681-2D4612-2Db6d4-2D2bce541980b4.png&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=8AV_G1t1EXstRjv3d9OZRN3uak_045O5H6NcJsATSrg&s=h8UMIEjID4vXSLNeeQEd5MnhIskUpomxFvCQM6dJqpA&e=

Best,

Fengchao

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fcyu commented 3 years ago

Can you try it in a new folder without any files?

rajeshksoni11 commented 3 years ago

HI, I am not able to browse the folder:

java.nio.file.InvalidPathException: Illegal char <:> at index 0: ::{20D04FE0-3AEA-1069-A2D8-08002B30309D} at java.base/sun.nio.fs.WindowsPathParser.normalize(Unknown Source) at java.base/sun.nio.fs.WindowsPathParser.parse(Unknown Source) at java.base/sun.nio.fs.WindowsPathParser.parse(Unknown Source) at java.base/sun.nio.fs.WindowsPath.parse(Unknown Source) at java.base/sun.nio.fs.WindowsFileSystem.getPath(Unknown Source) at java.base/java.io.File.toPath(Unknown Source) at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel$3.accept(TmtiPanel.java:777) at java.desktop/javax.swing.JFileChooser.accept(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicDirectoryModel$FilesLoader.run0(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicDirectoryModel$FilesLoader.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source)

From: Fengchao @.> Sent: Wednesday, September 22, 2021 1:05 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Can you try it in a new folder without any files?

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fcyu commented 3 years ago

Can you create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again?

rajeshksoni11 commented 3 years ago

HI, When i select the annotation file in new folder, i see this error"

please check my ANNOTATION FILE.

java.lang.ArrayIndexOutOfBoundsException: Index 1 out of bounds for length 1 at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel.parseTmtAnnotationFile(TmtiPanel.java:616) at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel.actionEditCreate(TmtiPanel.java:858) at com.dmtavt.fragpipe.tools.tmtintegrator.TmtiPanel$2.actionPerformed(TmtiPanel.java:248) at com.github.chhh.utils.swing.renderers.ButtonColumn.actionPerformed(ButtonColumn.java:195) at java.desktop/javax.swing.AbstractButton.fireActionPerformed(Unknown Source) at java.desktop/javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source) at java.desktop/javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source) at java.desktop/javax.swing.DefaultButtonModel.setPressed(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source) at java.desktop/java.awt.Component.processMouseEvent(Unknown Source) at java.desktop/javax.swing.JComponent.processMouseEvent(Unknown Source) at java.desktop/java.awt.Component.processEvent(Unknown Source) at java.desktop/java.awt.Container.processEvent(Unknown Source) at java.desktop/java.awt.Component.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicTableUI$Handler.repostEvent(Unknown Source) at java.desktop/javax.swing.plaf.basic.BasicTableUI$Handler.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.AWTEventMulticaster.mouseReleased(Unknown Source) at java.desktop/java.awt.Component.processMouseEvent(Unknown Source) at java.desktop/javax.swing.JComponent.processMouseEvent(Unknown Source) at java.desktop/java.awt.Component.processEvent(Unknown Source) at java.desktop/java.awt.Container.processEvent(Unknown Source) at java.desktop/java.awt.Component.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.processMouseEvent(Unknown Source) at java.desktop/java.awt.LightweightDispatcher.dispatchEvent(Unknown Source) at java.desktop/java.awt.Container.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Window.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.Component.dispatchEvent(Unknown Source) at java.desktop/java.awt.EventQueue.dispatchEventImpl(Unknown Source) at java.desktop/java.awt.EventQueue$4.run(Unknown Source) at java.desktop/java.awt.EventQueue$4.run(Unknown Source) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.desktop/java.awt.EventQueue$5.run(Unknown Source) at java.desktop/java.awt.EventQueue$5.run(Unknown Source) at java.base/java.security.AccessController.doPrivileged(Native Method) at java.base/java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(Unknown Source) at java.desktop/java.awt.EventQueue.dispatchEvent(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.desktop/java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.desktop/java.awt.EventDispatchThread.run(Unknown Source)

From: Fengchao @.> Sent: Wednesday, September 22, 2021 1:10 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Can you create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again?

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channel Sample 126 Pool 127N A 127C A 128N A 128C B 129N B 129C B 130N C 130C C 131 C

fcyu commented 3 years ago

Please do NOT select existing annotation file because it seems that your file is corrupted. Please click edit/create to get a new one. That is why I told you to "create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again". Only keeping mzml/raw files in your folder.

rajeshksoni11 commented 3 years ago

Thank you Fengchao. It is working now.

Rajesh Kumar Soni , PhD Proteomics Core Manager Lasker Biomedical Research Building 3960 Broadway, 3rd Floor, Room 350D (Entrance on 166th St.) Columbia University Medical Center New York, NY 10032 Email: @.*** Tel: 212-342-4177

From: Fengchao @.> Sent: Wednesday, September 22, 2021 1:23 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Please do NOT select existing annotation file because it seems that your file is corrupted. Please click edit/create to get a new one. That is why I told you to "create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again". Only keeping mzml/raw files in your folder.

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anesvi commented 3 years ago

Rajesh, Can I ask you to check the encoding in your annotation.tsv text file? How did you create it? I actually had this issue myself once, creating annotation.tsv from Excel, and the file was saved with a strange encoding that was breaking FragPIpe Thanks Alexey

From: rajeshksoni11 @.> Sent: Wednesday, September 22, 2021 1:34 PM To: Nesvilab/FragPipe @.> Cc: Subscribed @.***> Subject: Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

External Email - Use Caution Thank you Fengchao. It is working now.

Rajesh Kumar Soni , PhD Proteomics Core Manager Lasker Biomedical Research Building 3960 Broadway, 3rd Floor, Room 350D (Entrance on 166th St.) Columbia University Medical Center New York, NY 10032 Email: @.<mailto:@.> Tel: 212-342-4177

From: Fengchao @.<mailto:@.>> Sent: Wednesday, September 22, 2021 1:23 PM To: Nesvilab/FragPipe @.<mailto:@.>> Cc: Soni, Rajesh K. @.<mailto:@.>>; Author @.<mailto:@.>> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Please do NOT select existing annotation file because it seems that your file is corrupted. Please click edit/create to get a new one. That is why I told you to "create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again". Only keeping mzml/raw files in your folder.

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rajeshksoni11 commented 3 years ago

Hi Alexey, Here is the annotation file from excel. Thank you very much for all your help. Best, Rajesh

From: Alexey Nesvizhskii @.> Sent: Wednesday, September 22, 2021 1:36 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Rajesh, Can I ask you to check the encoding in your annotation.tsv text file? How did you create it? I actually had this issue myself once, creating annotation.tsv from Excel, and the file was saved with a strange encoding that was breaking FragPIpe Thanks Alexey

From: rajeshksoni11 @.> Sent: Wednesday, September 22, 2021 1:34 PM To: Nesvilab/FragPipe @.> Cc: Subscribed @.***> Subject: Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

External Email - Use Caution Thank you Fengchao. It is working now.

Rajesh Kumar Soni , PhD Proteomics Core Manager Lasker Biomedical Research Building 3960 Broadway, 3rd Floor, Room 350D (Entrance on 166th St.) Columbia University Medical Center New York, NY 10032 Email: @.<mailto:@.> Tel: 212-342-4177

From: Fengchao @.<mailto:@.>> Sent: Wednesday, September 22, 2021 1:23 PM To: Nesvilab/FragPipe @.<mailto:@.>> Cc: Soni, Rajesh K. @.<mailto:@.>>; Author @.<mailto:@.>> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Please do NOT select existing annotation file because it seems that your file is corrupted. Please click edit/create to get a new one. That is why I told you to "create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again". Only keeping mzml/raw files in your folder.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_Nesvilab_FragPipe_issues_467-23issuecomment-2D925129823&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=MM5zxsf4tZ-5aWgU0VC3Hc8sVqbw1l0WfR6MTHbQz-I&e=, or unsubscribehttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_notifications_unsubscribe-2Dauth_ATHFHTFP3KFG7TWO74V4E6TUDIGIVANCNFSM5ERYY2XA&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=wndkQCzSLLZ3X9Lk9tPmcnAsEM3xniLJ9eUAHG907uo&e=. Triage notifications on the go with GitHub Mobile for iOShttps://urldefense.proofpoint.com/v2/url?u=https-3A__apps.apple.com_app_apple-2Dstore_id1477376905-3Fct-3Dnotification-2Demail-26mt-3D8-26pt-3D524675&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=XYUyb_TKo6UaG3YvtkngLuDNxOFlOPGkmbdW2xwcOVc&e= or Androidhttps://urldefense.proofpoint.com/v2/url?u=https-3A__play.google.com_store_apps_details-3Fid-3Dcom.github.android-26referrer-3Dutm-5Fcampaign-253Dnotification-2Demail-2526utm-5Fmedium-253Demail-2526utm-5Fsource-253Dgithub&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=RoCgZVpHhyVWM3qhYcVdWWwEnOe83zePPX7uEZtSeCA&e=.

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anesvi commented 3 years ago

I do not see any attachment, please email directly to me or Fengchao

From: rajeshksoni11 @.> Sent: Wednesday, September 22, 2021 1:41 PM To: Nesvilab/FragPipe @.> Cc: Nesvizhskii, Alexey @.>; Comment @.> Subject: Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

External Email - Use Caution Hi Alexey, Here is the annotation file from excel. Thank you very much for all your help. Best, Rajesh

From: Alexey Nesvizhskii @.<mailto:@.>> Sent: Wednesday, September 22, 2021 1:36 PM To: Nesvilab/FragPipe @.<mailto:@.>> Cc: Soni, Rajesh K. @.<mailto:@.>>; Author @.<mailto:@.>> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Rajesh, Can I ask you to check the encoding in your annotation.tsv text file? How did you create it? I actually had this issue myself once, creating annotation.tsv from Excel, and the file was saved with a strange encoding that was breaking FragPIpe Thanks Alexey

From: rajeshksoni11 @.<mailto:@.>> Sent: Wednesday, September 22, 2021 1:34 PM To: Nesvilab/FragPipe @.<mailto:@.>> Cc: Subscribed @.<mailto:@.>> Subject: Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

External Email - Use Caution Thank you Fengchao. It is working now.

Rajesh Kumar Soni , PhD Proteomics Core Manager Lasker Biomedical Research Building 3960 Broadway, 3rd Floor, Room 350D (Entrance on 166th St.) Columbia University Medical Center New York, NY 10032 Email: @.<mailto:@.mailto:***@***.***%3cmailto:***@***.***> Tel: 212-342-4177

From: Fengchao @.<mailto:@.mailto:***@***.***%3cmailto:***@***.***>> Sent: Wednesday, September 22, 2021 1:23 PM To: Nesvilab/FragPipe @.<mailto:@.mailto:***@***.***%3cmailto:***@***.***>> Cc: Soni, Rajesh K. @.<mailto:@.mailto:***@***.***%3cmailto:***@***.***>>; Author @.<mailto:@.mailto:***@***.***%3cmailto:***@***.***>> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)

Please do NOT select existing annotation file because it seems that your file is corrupted. Please click edit/create to get a new one. That is why I told you to "create a new folder, move all your mzML/raw files to there, restart FragPipe, and try again". Only keeping mzml/raw files in your folder.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_Nesvilab_FragPipe_issues_467-23issuecomment-2D925129823&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=MM5zxsf4tZ-5aWgU0VC3Hc8sVqbw1l0WfR6MTHbQz-I&e=, or unsubscribehttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_notifications_unsubscribe-2Dauth_ATHFHTFP3KFG7TWO74V4E6TUDIGIVANCNFSM5ERYY2XA&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=wndkQCzSLLZ3X9Lk9tPmcnAsEM3xniLJ9eUAHG907uo&e=. Triage notifications on the go with GitHub Mobile for iOShttps://urldefense.proofpoint.com/v2/url?u=https-3A__apps.apple.com_app_apple-2Dstore_id1477376905-3Fct-3Dnotification-2Demail-26mt-3D8-26pt-3D524675&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=XYUyb_TKo6UaG3YvtkngLuDNxOFlOPGkmbdW2xwcOVc&e= or Androidhttps://urldefense.proofpoint.com/v2/url?u=https-3A__play.google.com_store_apps_details-3Fid-3Dcom.github.android-26referrer-3Dutm-5Fcampaign-253Dnotification-2Demail-2526utm-5Fmedium-253Demail-2526utm-5Fsource-253Dgithub&d=DwMCaQ&c=G2MiLlal7SXE3PeSnG8W6_JBU6FcdVjSsBSbw6gcR0U&r=3kGEWBYAR_TOTPC4fFAqpAKTOUJHGP7jqdAzaZ1xUoQ&m=nGtE7K_4w2Ww-tn17dn8blwOcuATZfUEyjD8KMngh8s&s=RoCgZVpHhyVWM3qhYcVdWWwEnOe83zePPX7uEZtSeCA&e=.

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rajeshksoni11 commented 3 years ago

Rajesh Kumar Soni , PhD Proteomics Core Manager Lasker Biomedical Research Building 3960 Broadway, 3rd Floor, Room 350D (Entrance on 166th St.) Columbia University Medical Center New York, NY 10032 Email: @.*** Tel: 212-342-4177

From: Alexey Nesvizhskii @.> Sent: Wednesday, September 22, 2021 1:48 PM To: Nesvilab/FragPipe @.> Cc: Soni, Rajesh K. @.>; Author @.> Subject: [EXTERNAL] Re: [Nesvilab/FragPipe] TMT10-plex error (#467)