NeuroBench / neurobench

Benchmark harness and baseline results for the NeuroBench algorithm track.
https://neurobench.readthedocs.io
Apache License 2.0
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Example bugs #165

Closed bucklesm closed 9 months ago

bucklesm commented 9 months ago

Just starting with the repo and testing the examples. Following issues:

jasonlyik commented 9 months ago

Thanks for checking out the repo @bucklesm! We're finalizing cleanup now in the dev branch before moving everything over to main, there are a ton of updates that we're going to push for a polished v1.0.

bucklesm commented 9 months ago

Thanks @jasonlyik! I have been playing with the NHP task, in both the main and dev branches. I've found it tricky to parse what the input data is as well as some of the processing that seems to happen within the ANN (and how you choose the dividing line for "pre-processing"). I'm looking forward to the v1.0. If there's a document describing the data flow (especially for the NHP benchmark) a little in the meantime, I'd love to take a look.

jasonlyik commented 8 months ago

@bucklesm For the regression tasks NHP and MackeyGlass, we use a slightly different data format where each timestep is considered a different sample, and the prediction is the next timestep data. So the data tensor ends up as [B, T, F], B = number of samples (timesteps) to predict, T = 1 timestep per sample, F = 96 or 192 spike features. We can add more detail to the tutorials with the full version up as well!