Make ndviz projects showing all your brains with overlays of the atlas in both native and ARA orientation (like this).
Count the number of bright points in each region
Make the units in physical space in order to prevent the voxel distortion of the z plane.
Update registration to take ~10 minutes rather than 4 hrs.
Obtain a preliminary estimate of connectivity between regions based on existing brightest points approach.
Provide detailed instructions for how to best generate manually labeled data for tracing processes.
Make ndviz projects showing all your brains with overlays of the atlas in both native and ARA orientation (like this). Count the number of bright points in each region Make the units in physical space in order to prevent the voxel distortion of the z plane. Update registration to take ~10 minutes rather than 4 hrs. Obtain a preliminary estimate of connectivity between regions based on existing brightest points approach. Provide detailed instructions for how to best generate manually labeled data for tracing processes.