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NeuroDesk / neurocontainers

The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines
https://www.neurodesk.org
MIT License
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New container micapipe v0.2.3 #825

Closed vnm-neurodesk closed 1 month ago

vnm-neurodesk commented 2 months ago

There is a new container by @stebo85, use this command to test on Neurodesk (either a local installation or https://play.neurodesk.org/):

bash /neurocommand/local/fetch_and_run.sh micapipe v0.2.3 20240927

Or, for testing directly with Apptainer/Singularity:

curl -X GET https://neurocontainers.neurodesk.org/temporary-builds-new/micapipe_v0.2.3_20240927.simg -O
singularity shell micapipe_v0.2.3_20240927.simg

If test was successful, then add to apps.json to release: https://github.com/NeuroDesk/neurocommand/edit/main/neurodesk/apps.json

Please close this issue when completed :)