NeuroML / NeuroML2

This repository hosts the NeuroML 2 Schema, the ComponentType definitions in LEMS and the core documentation of NeuroML2.
https://docs.neuroml.org
GNU Lesser General Public License v3.0
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Create list of exemplar single cell models in NeuroML2 #126

Open pgleeson opened 4 years ago

pgleeson commented 4 years ago

As requested by @gidili, a list of some NML2 models with just a single cell and a current input (leading to some reasonable behaviour, and ideally executable on OSB), which can be used for various testing purposes.

Abstract cells
Izhikevich LEMS NML2 OSB
FitzHugh-Nagumo LEMS NML2 OSB
Brunel 2000 (spiking input to I&F cell!) LEMS NML2 OSB
xxx [LEMS]() [NML2]() [OSB]()
xxx [LEMS]() [NML2]() [OSB]()
1 compartment, conductance based
Hodgkin Huxley LEMS NML2 OSB
Minimal HH models Pospischil et al. 2008 LEMS NML2 OSB
Cerebellar Granule cell, Maex & De Schutter 1998 LEMS NML2 OSB
Wang & Buzsaki 1996 LEMS NML2 OSB
C. elegans Muscle model Boyle & Cohen 2008 (2 inputs!) LEMS NML2 OSB
Multicompartmental
Hay et al. 2011 L2/3 Pyramidal cell LEMS NML2 OSB
Smith et al. 2013 L2/3 pyramidal cell LEMS NML2 OSB
Allen Cell Types DB cell LEMS NML2 OSB
pgleeson commented 4 years ago

More will be added next week...

pgleeson commented 4 years ago

@dilawar this might be useful for you also for Moose testing.