pynml-modchananalysis: allow saving of plots without user intervention (for batch processing)

NeuroML / pyNeuroML

A single package in Python unifying scripts and modules for reading, writing, simulating and analysing NeuroML2/LEMS models.

https://docs.neuroml.org/Userdocs/Software/pyNeuroML.html

GNU Lesser General Public License v3.0

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pynml-modchananalysis: allow saving of plots without user intervention (for batch processing) #201

Closed sanjayankur31 closed 2 months ago

sanjayankur31 commented 1 year ago

At the moment, if one uses -nogui, only the data files are stored but the figures (which are generated) are just discarded. Ideally, when a user says -nogui the data and the figure files should be saved. This will allow batch processing where I can run pynml-modchananalsyis * on a bunch of files and just let it run. At the moment, the graphs are generated and users have to manually save them to file.

YBCS commented 5 months ago

@sanjayankur31 can I work on this

sanjayankur31 commented 5 months ago

Sure, assigned to you now

@YBCS : please do start working on your proposal for GSoC if you haven't already. We'll be able to give you feedback by wednesday evening. (We have Friday and Monday as holidays here, so we wont be working from Friday until Tuesday)