Verification failed in tests.system.ElectricalSeriesIOTest/testOutToPyNWB.
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Test Diagnostic:
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E
======================================================================
ERROR: testInFromMatNWB (PyNWBIOTest.ElectricalSeriesIOTest)
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Traceback (most recent call last):
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1140, in construct
obj = cls(**kwargs)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/core.py", line 991, in __init__
col = col_dict[name]
KeyError: 'x'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/Users/bendichter/dev/matnwb/+tests/+system/PyNWBIOTest.py", line 32, in testInFromMatNWB
matfile = io.read()
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/backends/io.py", line 33, in read
container = self.__manager.construct(f_builder)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 195, in construct
result = self.__type_map.construct(builder, self)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1556, in construct
return attr_map.construct(builder, build_manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1116, in construct
subspecs = self.__get_subspec_values(builder, self.spec, manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1060, in __get_subspec_values
self.__get_sub_builders(groups, spec.groups, manager, ret)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1098, in __get_sub_builders
ret.update(self.__get_subspec_values(sub_builder, subspec, manager))
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1060, in __get_subspec_values
self.__get_sub_builders(groups, spec.groups, manager, ret)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1090, in __get_sub_builders
sub_builder = self.__flatten(sub_builder, subspec, manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1103, in __flatten
tmp = [manager.construct(b) for b in sub_builder]
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1103, in <listcomp>
tmp = [manager.construct(b) for b in sub_builder]
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 195, in construct
result = self.__type_map.construct(builder, self)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1556, in construct
return attr_map.construct(builder, build_manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1116, in construct
subspecs = self.__get_subspec_values(builder, self.spec, manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1061, in __get_subspec_values
self.__get_sub_builders(datasets, spec.datasets, manager, ret)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1100, in __get_sub_builders
ret[subspec] = manager.construct(sub_builder)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 195, in construct
result = self.__type_map.construct(builder, self)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1556, in construct
return attr_map.construct(builder, build_manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1116, in construct
subspecs = self.__get_subspec_values(builder, self.spec, manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1026, in __get_subspec_values
ret[attr_spec] = manager.construct(attr_val)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 195, in construct
result = self.__type_map.construct(builder, self)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1556, in construct
return attr_map.construct(builder, build_manager)
File "/Users/bendichter/dev/pynwb/src/pynwb/form/utils.py", line 381, in func_call
return func(self, **parsed['args'])
File "/Users/bendichter/dev/pynwb/src/pynwb/form/build/map.py", line 1144, in construct
raise_from(Exception(msg), ex)
File "<string>", line 3, in raise_from
Exception: Could not construct DynamicTable object
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Ran 1 test in 0.059s
FAILED (errors=1)
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Stack Information:
------------------
In /Users/bendichter/dev/matnwb/+tests/+system/PyNWBIOTest.m (PyNWBIOTest.testOutToPyNWB) at 15
bendichter
commented
5 years ago
I don't know what is causing this bug