OptiNiSt(Optical Neuroimage Studio) helps researchers try multiple data analysis methods, visualize the results, and construct the data analysis pipelines easily and quickly. OptiNiSt’s data-saving format follows NWB standards.
It looks like it can read HDF5/NWB and outputs in NWB.
bendichter
commented
1 year ago
OptiNiSt - Calcium Imaging Pipeline Tool
OptiNiSt(Optical Neuroimage Studio) helps researchers try multiple data analysis methods, visualize the results, and construct the data analysis pipelines easily and quickly. OptiNiSt’s data-saving format follows NWB standards.
It looks like it can read HDF5/NWB and outputs in NWB.
Documentation: https://optinist.readthedocs.io/en/latest/index.html Code: https://github.com/oist/optinist/ Tutorial at CNS 2023: https://www.dropbox.com/sh/z0awh38hpwrjchs/AABjmXTvNjrHnsO9lh-jh9fma?dl=0