NeurodataWithoutBorders / nwb-schema

Data format specification schema for the NWB neurophysiology data format
http://nwb-schema.readthedocs.io
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Why is optical channel not a link in ImagingPlane? #568

Closed ehennestad closed 9 months ago

ehennestad commented 9 months ago

Let's say I have a multichannel, multiplane (multiple depths) two-photon recording. For each ImagingPlane I would use the same optical channel but following the schema I need to add duplicated instances of the OpticalChannel to each imaging plane at different depths

CodyCBakerPhD commented 9 months ago

This is one of several things about the ophys schemas being improved in the ndx-microscopy extension which is then planned to then be submitted to the TAB for approval to be integrated into the core here

rly commented 9 months ago

The ndx-multichannel-volume extension for multichannel multiplane imaging should also support this.

ehennestad commented 9 months ago

Thanks for clarifications!