[Bug]: HDMF 3.5.5 breaks streaming tests - Githubissues

NeurodataWithoutBorders / nwbinspector

Tool to help inspect NWB files for compliance with NWB Best Practices

https://nwbinspector.readthedocs.io/

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[Bug]: HDMF 3.5.5 breaks streaming tests #365

Open CodyCBakerPhD opened 1 year ago

CodyCBakerPhD commented 1 year ago

What happened?

As seen from daily reports: https://github.com/NeurodataWithoutBorders/nwbinspector/actions/workflows/dailies.yml

The consistent failures with the streaming tests started after the latest release of HDMF 3.5.5

@rly any idea why this would happen? See https://github.com/NeurodataWithoutBorders/nwbinspector/actions/runs/4734489840/jobs/8403485492 for instance of the failure logs

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[X] I agree to follow this project's Code of Conduct
[X] Have you ensured this bug was not already reported?
[X] To the best of your ability, have you ensured this is a bug within the code that checks the NWBFile, rather than a bug in the NWBFile reader (e.g., PyNWB or MatNWB)?

bendichter commented 1 year ago

We should fix this, but it also might be a good time to consider migrating streaming over to fsspec, which should not have the same issues.