NeurodataWithoutBorders / pynwb

A Python API for working with Neurodata stored in the NWB Format
https://pynwb.readthedocs.io
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Add `read_nwb_method` for local paths in both hdf5 and zarr #1994

Open h-mayorquin opened 1 week ago

h-mayorquin commented 1 week ago

Motivation

See #1974

How to test the behavior?

I added tests.

Checklist

codecov[bot] commented 1 week ago

Codecov Report

Attention: Patch coverage is 18.18182% with 9 lines in your changes missing coverage. Please review.

Project coverage is 91.58%. Comparing base (7087f00) to head (f95ffc5).

Files with missing lines Patch % Lines
src/pynwb/__init__.py 18.18% 9 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## dev #1994 +/- ## ========================================== - Coverage 91.88% 91.58% -0.30% ========================================== Files 27 27 Lines 2711 2722 +11 Branches 707 710 +3 ========================================== + Hits 2491 2493 +2 - Misses 144 153 +9 Partials 76 76 ``` | [Flag](https://app.codecov.io/gh/NeurodataWithoutBorders/pynwb/pull/1994/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=NeurodataWithoutBorders) | Coverage Δ | | |---|---|---| | [integration](https://app.codecov.io/gh/NeurodataWithoutBorders/pynwb/pull/1994/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=NeurodataWithoutBorders) | `72.63% <18.18%> (-0.23%)` | :arrow_down: | | [unit](https://app.codecov.io/gh/NeurodataWithoutBorders/pynwb/pull/1994/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=NeurodataWithoutBorders) | `82.58% <18.18%> (-0.27%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=NeurodataWithoutBorders#carryforward-flags-in-the-pull-request-comment) to find out more.

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