Use the FLUX pipeline to analyse a CTF MEG data set

Neuronal-Oscillations / FLUX

The FLUX pipeline for analysis of MEG data using MNE Python

https://neuosc.com/flux/

BSD 3-Clause "New" or "Revised" License

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Use the FLUX pipeline to analyse a CTF MEG data set #21

Open oscfer88 opened 2 years ago

oscfer88 commented 2 years ago

Run the whole pipeline on a CTF MEG data set. This task will require to change 1) how the data are read and 2) how the noise is removed (i.e., third-order gradient compensation instead of SSS/maxfilter)

A sample EEG data set can be downloaded from the FieldTrip website. If you plane to use your own data, please provide details about the paradigm and the recoding paraments used.

finch-f commented 1 year ago

Hi, Could you tell me how to modify the following codes to perform third-order gradient compensation on CTF MEG data? Many thanks!

raw_sss = mne.preprocessing.maxwell_filter( raw_check, cross_talk=crosstalk_file, calibration=cal_file, verbose=True)