Can NextSV take gzipped input?

Nextomics / nextsv

MIT License

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Can NextSV take gzipped input? #10

Closed gbdias closed 5 years ago

gbdias commented 5 years ago

Hi,

Can NextSV take gzipped fasta files as input?

Thanks, Guilherme

fangli80 commented 5 years ago

Hi Guilherme, Thank you for using NextSV! Currently, NextSV does not support gzipped fasta files as input because blasr does not support it. Please manually unzip the file. We will support gzipped fasta files soon.

Best, Li