arrow keyboard doesn't work (Fixed: for matplotlib > 3)

[KamiCalcium]

Hi,

Great work!

When I try the 3D Skeleton Interactive Annotation using the pre-trained weights, the keyboard is not working correctly. 0-9 are fine, the figure shows the different selected limb when I click. However, arrow keyboards are not working:

Traceback (most recent call last):
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/matplotlib/cbook/__init__.py", line 224, in process
    func(*args, **kwargs)
  File "annotate_3D.py", line 96, in press
    update_skeleton(angle_idx, event.key)
  File "annotate_3D.py", line 337, in update_skeleton
    update_global(angle_idx)
  File "annotate_3D.py", line 282, in update_global
    update_line(line_idx, parent_idx, child_idx)
  File "annotate_3D.py", line 265, in update_line
    lines[line_idx][0].set_3d_properties(z)
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/mpl_toolkits/mplot3d/art3d.py", line 143, in set_3d_properties
    zs = np.broadcast_to(zs, xs.shape)
AttributeError: 'list' object has no attribute 'shape'

up, down, right or left all shows the same error. I tried debug thru printing the (event.key) and it shows that the received keyboard is correct (i.e. printing up, down, left, right when I click the corresponding key).

Could you please take a look on this? Thanks a lot!

[Nicholasli1995]

Hi,

Great work!

When I try the 3D Skeleton Interactive Annotation using the pre-trained weights, the keyboard is not working correctly. 0-9 are fine, the figure shows the different selected limb when I click. However, arrow keyboards are not working:

Traceback (most recent call last):
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/matplotlib/cbook/__init__.py", line 224, in process
    func(*args, **kwargs)
  File "annotate_3D.py", line 96, in press
    update_skeleton(angle_idx, event.key)
  File "annotate_3D.py", line 337, in update_skeleton
    update_global(angle_idx)
  File "annotate_3D.py", line 282, in update_global
    update_line(line_idx, parent_idx, child_idx)
  File "annotate_3D.py", line 265, in update_line
    lines[line_idx][0].set_3d_properties(z)
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/mpl_toolkits/mplot3d/art3d.py", line 143, in set_3d_properties
    zs = np.broadcast_to(zs, xs.shape)
AttributeError: 'list' object has no attribute 'shape'

up, down, right or left all shows the same error. I tried debug thru printing the (event.key) and it shows that the received keyboard is correct (i.e. printing up, down, left, right when I click the corresponding key).

Could you please take a look on this? Thanks a lot!

I'm working on this issue. The tools was tested on matplotlib 2.2.2 and is not working on matplotlib 3. Will let you know once I update the tool.

[Nicholasli1995]

Hi,

Great work!

When I try the 3D Skeleton Interactive Annotation using the pre-trained weights, the keyboard is not working correctly. 0-9 are fine, the figure shows the different selected limb when I click. However, arrow keyboards are not working:

Traceback (most recent call last):
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/matplotlib/cbook/__init__.py", line 224, in process
    func(*args, **kwargs)
  File "annotate_3D.py", line 96, in press
    update_skeleton(angle_idx, event.key)
  File "annotate_3D.py", line 337, in update_skeleton
    update_global(angle_idx)
  File "annotate_3D.py", line 282, in update_global
    update_line(line_idx, parent_idx, child_idx)
  File "annotate_3D.py", line 265, in update_line
    lines[line_idx][0].set_3d_properties(z)
  File "/anaconda3/envs/pytorch/lib/python3.6/site-packages/mpl_toolkits/mplot3d/art3d.py", line 143, in set_3d_properties
    zs = np.broadcast_to(zs, xs.shape)
AttributeError: 'list' object has no attribute 'shape'

up, down, right or left all shows the same error. I tried debug thru printing the (event.key) and it shows that the received keyboard is correct (i.e. printing up, down, left, right when I click the corresponding key).

Could you please take a look on this? Thanks a lot!

Hi, I have fixed the version problem. You can pull the code and it should work fine. The tested environment is: numpy 1.19 + matplotlib 3.3.4 + scipy 1.5.2

[Nicholasli1995]

Re-open this issue if the patch does not solve your problem.

[KamiCalcium]

Hi,

Thanks for fixing. Now the 3D annotation works. However, annotation for 2D annotations seem doesn't work either under matplotlib > 3. Could you please check and fix too? There's no respond after I click mouse. Only Q can exit. N, C, Z, and mouse click don't work at all.

[KamiCalcium]

Re-open this issue if the patch does not solve your problem.

I don't think I can re-open it if it was not me that closed it. Could you please re-open this issue?

[Nicholasli1995]

Hi,

Thanks for fixing. Now the 3D annotation works. However, annotation for 2D annotations seem doesn't work either under matplotlib > 3. Could you please check and fix too? There's no respond after I click mouse. Only Q can exit. N, C, Z, and mouse click don't work at all.

I have fixed annotate_2d.py. It should work now.