NifTK / NiftyNet

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
http://niftynet.io
Apache License 2.0
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TensorflowTestCase makes our tests to be skipped in TF 1.13.1>= #381

Closed danieltudosiu closed 5 years ago

danieltudosiu commented 5 years ago
  1. What you were trying to do (and why) I have run the tests under an environment with TF 1.13.1/1.14.0rc0 and CUDA 10 with cudnn 7.5.

  2. What happened (include command output) Tests are being skipped due to the issue presented in Tensorflow #29439

  3. What you expected to happen To have only 23 tests skipped (given CV2 and SimpleITK are not installed) not 100+ tests

  4. Step-by-step reproduction instructions Git clone the dev branch before the merge titled "365 tensorflow upgrade nnhack", then upgrade TF to 1.13.1 and fix the misc_io.py and crf.py as per branch "365 tensorflow upgrade", and run the run_tests.sh.

  5. What has been done This is worked around in the "365 tensorflow upgrade nnhack" in a non OOP compliant way and the Tensorflow issue #29439 was created. This issue is to be able to keep track of it and not forget.