Clean up code

[yoBoyio]

Structure refactor:

Actions made: Move all results files to results folder Move all champion files to champion folder Move pdfs to literature folder Delete some deprecated files Fix some open() paths to read the correct path

TODO:

• clarify which others files we need to delete
• changes in some files that read or write the files from the wrong path (f.e: we should refactor all files to generate the results in results folder)