Closed TomasTorsvik closed 8 months ago
Hi @JorgSchwinger , I won't have time to look into it until Friday, but maybe could you tell, if it is only the carbon isotopes or other tracers as well?
I get bfb backwards compatible output for a standard 1 year NOINYOC_T62_tn21 run.
To clarify, other tracers than those related to C-isotopes are still bfb. I have been running with C-isotopes and sediment activated.
@mvertens my case directory is here:
/cluster/projects/nn2345k/schwinger/cases/NOINYOC_T62_tn21_27_test_2x1
@JorgSchwinger - thanks. I've been staring at the differences in the ocn log files - and it appears that no differences come in until time step 657557 (the run started at 657001) - that's a bit past 23 days into the run. I've been looking at the code - and its not clear to me what can trigger this after 23 days. Any suggestions as to where to look further?
< 0.0611 sec for step 657557
> 0.0613 sec for step 657557
4422c4422
< No. 8 11465951666961.4 0.292337603760911
> No. 8 11465951479028.5 0.292337598969346
4424c4424
< No. 9 -2.884235613280459E+015 -73.5368988426710
> No. 9 -2.884235613400504E+015 -73.5368988457317
4439c4439
< Sediment No. 5 16471567453430.7
> Sediment No. 5 16471567423524.1
4441c4441
< Sediment No. 6 -2.653883035249488E+015
> Sediment No. 6 -2.653883035734956E+015
@mvertens, @jmaerz @TomasTorsvik Update:
1) it is the sediment - with C-isotopes and sediment-bypass activated it is bfb (which explains why your tests, Mariana, passed) 2) Including the sediment both, pre-#280 and post-#280 results, don't look right, so there could be some coding error in the C-isotope sediment that plays out differently when ifdefs are removed
Results for 13C with sediment (looks wrong)
Results for 13C without sediment
Hi @JorgSchwinger , the mapping should work correctly after shifting the init of the tracer indices, right? You're using both times master
, just different versions, right - including already the fixes by Alok, I assume?
@jmaerz what do you mean by "shifting the init of the tracer indices"? I'm using master for both runs, just at different commits
@JorgSchwinger - sorry - a bit short thought: I meant the change in mo_param1_bgc
- now the initialization of the trc-indices called from somewhere in BLOM.
I have put in a PR (#287) that fixes this. The issue was that during a restart from restart files without C-isotopes, the initialization of C-isotopes is done in aufr_bgc
. This initialization uses observed d13C (not 13C), which has some advantages. However this wasn't done correctly in aufr_bgc
, and so d13C was used directly for initialization of the sediment fields. This meas there have been negative values, and this is never checked and catched (for sediment fields). I don't know exactly where and why a divergence between the code with and without ifdefs came from, but I imagine that there might have been NaN or inf values occurring, which played out differently in the compiled code with and without ifdefs. Don't know if this makes sense.
@JorgSchwinger - thanks so much for tracking this down! Are we okay then with moving to #281?
Merging PR #280 seems to have caused a change that breaks bfb reproducible results with earlier model versions. This was not an expected change from merging the PR.