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NorwegianVeterinaryInstitute
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DPI
Differences between Pairs of Isolates
BSD 3-Clause "New" or "Revised" License
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Making slurm bug ! chunk database making in steps
#32
evezeyl
opened
2 months ago
0
External bug - investigate impact ?
#31
evezeyl
opened
2 months ago
1
dpi.nf
#30
evezeyl
opened
6 months ago
0
TODO ENHANCEMENT LIST
#29
evezeyl
opened
9 months ago
0
Dev - Pipeline working
#28
evezeyl
closed
9 months ago
0
clean database - remove duplicate entries
#27
evezeyl
opened
1 year ago
0
SQ module
#26
evezeyl
opened
1 year ago
0
Merge pull request #24 from NorwegianVeterinaryInstitute/dev
#25
evezeyl
closed
1 year ago
0
Dev merging is updated
#24
evezeyl
closed
1 year ago
0
adjust memory and labels for module - so it runs faster
#23
evezeyl
opened
1 year ago
0
Nucdiff rename results and output per file - see how to add unaligned
#22
evezeyl
opened
1 year ago
0
remove result dir or output all from nucdiff
#21
evezeyl
closed
1 year ago
0
add name process running to saga - in process (so its more clear)
#20
evezeyl
opened
1 year ago
0
dev: failed to publish files
#19
evezeyl
closed
1 year ago
1
Add templates for data analysis
#18
evezeyl
opened
1 year ago
0
Better formating output tables for visualisation
#17
evezeyl
opened
1 year ago
0
allow updating a chosen database
#16
evezeyl
opened
1 year ago
0
Make final organigram of pipeline in readme
#15
evezeyl
opened
1 year ago
0
make a separate config file for conda and containers ? so can be updated more easily?
#14
evezeyl
opened
1 year ago
0
conda env for checkr
#13
evezeyl
opened
1 year ago
0
documentation - to complete
#12
evezeyl
opened
1 year ago
1
update workflow pipeline
#11
evezeyl
closed
1 year ago
1
Versions - own modules
#10
evezeyl
closed
1 year ago
2
Improve output of resutls
#9
evezeyl
opened
1 year ago
2
wrangling DB
#8
evezeyl
closed
1 year ago
1
Defensive input check
#7
evezeyl
closed
1 year ago
2
Split - Bakta - and remerge - and reuse - How
#6
evezeyl
closed
1 year ago
1
database wrangling script - bug
#5
evezeyl
closed
1 year ago
0
configure pipeline to run with modules osv on local config
#4
evezeyl
closed
1 year ago
1
add version to python scripts + move scripts
#3
evezeyl
closed
1 year ago
1
nextflow backbone
#2
evezeyl
closed
1 year ago
1
python image and packages to run
#1
evezeyl
closed
1 year ago
2