feature request: Add command-line arguments to demultiplex_script.py

NorwegianVeterinaryInstitute / DemultiplexRawSequenceData

A workflow automation script: demultiplex the library sequence, run quality checks, deliver to archiving and processing afterwards

GNU General Public License v3.0

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feature request: Add command-line arguments to demultiplex_script.py #19

Open georgemarselis-nvi opened 2 years ago

georgemarselis-nvi commented 2 years ago

A small number of command-line arguments should be incorporated into the demultiplex script, such as

--help
--version
--queue
--most-recent
--list-raw
--list-demutliplexed
--print-statistics
--longest-run
--shortest-run
--debug

arvindsundaram commented 2 years ago

I am not sure how important this will be - especially one needs to spend valuable hours to add these and to maintain these in the future.

georgemarselis-nvi commented 2 years ago

The command-line part is a (huge) convenience, during debugging or addressing from other scripts. The real value will be adding an api to the daemon to query it these parts.