def calcFileHash( DemultiplexRunID ) : do not hash any existing .md5 or .sha512 files present, but do report them

NorwegianVeterinaryInstitute / DemultiplexRawSequenceData

A workflow automation script: demultiplex the library sequence, run quality checks, deliver to archiving and processing afterwards

GNU General Public License v3.0

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def calcFileHash( DemultiplexRunID ) : do not hash any existing .md5 or .sha512 files present, but do report them #33

Closed georgemarselis-nvi closed 8 months ago

georgemarselis-nvi commented 1 year ago

        if any( var in file for var in [ demux.md5Suffix, demux.sha512Suffix ] ): # if you find any .md5 or .sha512 files, skip them
            continue

that way we can ignore any .md5.md5.md5.sha512.md5.sha512.md5 silliness.

georgemarselis-nvi commented 1 year ago

[x] ignore existing md5 / sha512 files
[x] report via logging any found
[x] report via email any found

georgemarselis-nvi commented 1 year ago

done. closing ticket.