Issue with R when using a personal .Rprofile

NorwegianVeterinaryInstitute / Talos

A shotgun metagenomic analysis pipeline using nextflow

BSD 3-Clause "New" or "Revised" License

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Issue with R when using a personal .Rprofile #45

Open hkaspersen opened 2 years ago

hkaspersen commented 2 years ago

I have a personal .Rprofile file with the following content:

path <- "/cluster/projects/nn9305k/lib/R/"
.libPaths(c(path, .libPaths()))

This is to make sure that my R processes all use the same R library. This however seems to interfere with the R processes in this pipeline as well, even when sandboxing. Removing the file fixes the issue.