Decide the Percentage/proportion of mapped reads to make a confirmation call of a Species

NorwegianVeterinaryInstitute / irida-plugin-readsQC

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Decide the Percentage/proportion of mapped reads to make a confirmation call of a Species #13

Open ajkarloss opened 10 months ago

ajkarloss commented 10 months ago

Currently, in Assembly_QC and Species Abundance Pipeline outputs the first result as the predicted species without any cutoff. But we need a species specific cutoff number for the pipelines.