OBOAcademy / obook

OBO Organized Knowledge: Training materials for becoming an OBO engineer
https://oboacademy.github.io/obook/
Creative Commons Zero v1.0 Universal
89 stars 38 forks source link

Add a tutorial for setting up bulk ontology inserts via a spreadsheet of terms following a specific design pattern #43

Open sierra-moxon opened 2 years ago

sierra-moxon commented 2 years ago

I have a spreadsheet that follows a design pattern (cell part of anatomy pattern). Can I use robot to do bulk inserts into an ontology (and then make a PR for review out of the result, for example)?

In particular, I have ETL development friends (users) that have a reoccurring pipeline that often makes post-composed terms that should be pre-composed in the Cell Ontology. They are curious about automating PRs to help speed up the process of term addition.

Thanks for your help in advance!

jamesaoverton commented 2 years ago

One good existing resource is https://github.com/EnvironmentOntology/envo/wiki/ENVO-Robot-template-and-merge-workflow