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OBOFoundry / COB

An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
https://obofoundry.github.io/COB
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COB cites BFO_0000041 as "immaterial entity" rather than BFO_0000141 #249

Closed khelm closed 9 months ago

khelm commented 9 months ago

In COB itself and in the COB documentation, BFO_0000041 is cited as "immaterial entity", but in the BFO OWL file "immaterial entity" is BFO_0000141.

immaterial entity There are also child terms in COB that use BFO_0000041 as a parent, e.g., geographical location Documentation: See: https://obofoundry.org/COB/obo-bridge/ Example Entries COB:0000031 immaterial entity owl:equivalentClass BFO:0000041 immaterial entity
matentzn commented 9 months ago

@khelm thank you for your issue!

The error was fixed (#233) in May or so last year, but unfortunately, the docs were not updated correctly.

The issue should be fixed here: https://github.com/OBOFoundry/COB/pull/250

I cannot find any mentions of the wrong IRI in the ontology files with

grep -r -l BFO_0000041 .

or GitHub search.

khelm commented 9 months ago

Great, thanks! I'll update my COB files.