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OBOFoundry / Operations-Committee-RETIRED

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OBIB Prefix/Domain creation #152

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 

- Title: Ontology for Biobanking

- Short description: The ontology for biobanking is an ontology built for 
annotation and modeling of biobank repository and biobanking administration. It 
is developed based on subset of Ontology for Biomedical Investigation (OBI) 
using Basic Formal Ontology (BFO) and following OBO Foundry principles. The 
first version of the ontology is merged of two existing biobank related 
ontologies, OMIABIS and biobank ontology.

- Download link:  
https://raw.githubusercontent.com/biobanking/biobanking/master/ontology/biobank-
omiabis.owl

- Home page: https://github.com/biobanking/biobanking/wiki

- Contact: Jie Zheng (jiezheng@upenn.edu; Purl name jzheng), Mathias 
Brochhausen (mbrochhausen@gmail.com; PURL name: mbrochhausen)

- Mailing-list (if any): 
https://groups.google.com/forum/?hl=en#!forum/biobanking-discuss

 - Tracker link: https://github.com/biobanking/biobanking/issues

We have send out an e-mail to obo-discuss@lists.sourceforge.net, cc
obo-admin@fruitfly.org. 
http://sourceforge.net/p/obo/mailman/message/32926528/

Our ontology is open access."

Original issue reported on code.google.com by MBrochhausen@gmail.com on 14 Oct 2014 at 3:18

GoogleCodeExporter commented 9 years ago 
We have room only for one contact name - can you decide which you'd like? 

It seems (as you may have seen on the list) that PURL domains need to be 
manually requested now - I'll try and make a list of the outstanding ones to 
submit to Jeff.

Cheers,
Melanie

Original comment by mcour...@gmail.com on 27 Oct 2014 at 9:16

GoogleCodeExporter commented 9 years ago 
Since only one contact name is allowed, Jie is added as contact. Both Jie and 
Mathias are added as member of obo-obib group which allows them to manage OBIB 
domain and PURL settings.

--------------------------
created PURL group obo-obib
created PURL domain /obo/obib
created obo/obib.owl purl (http://purl.obolibrary.org/obo/obib.owl redirects to 
the ontology download link provided by Mathias)
added info in obo metadata files

TODO: check in a few days that all went well

Original comment by zhengj2...@gmail.com on 14 Jan 2015 at 1:13

GoogleCodeExporter commented 9 years ago

Original comment by zhengj2...@gmail.com on 15 Jan 2015 at 6:25