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OHDSI / Achilles

Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM database
https://ohdsi.github.io/Achilles/
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Sample Dataset in CDM v4 #11

Closed mazimi closed 10 years ago

mazimi commented 10 years ago

Is there a sample dataset that is CDM v4 that I can use Achilles with? The OMOP website provides OSIM and OSIM2 but they both appear to be using legacy CDMs.

pbr6cornell commented 10 years ago

No sample data yet. This should give you incentive to put your data into OMOP CDMv4 so you get to take advantage of all the cool tools OHDSI is pushing out...

Cheers,

Patrick

On Mon, Jun 16, 2014 at 8:08 PM, Mohammad Azimi notifications@github.com wrote:

Is there a sample dataset that is CDM v4 that I can use Achilles with? The OMOP website provides OSIM and OSIM2 but they both appear to be using legacy CDMs.

— Reply to this email directly or view it on GitHub https://github.com/OHDSI/Achilles/issues/11.

cgreich commented 10 years ago

Patrick:

I might be able to put somebody on revamping the Rich Murphy code and create a simulated dataset. My hunch is that it will take time to contribute with real data because of stupid legal holdup.

C

From: Patrick Ryan [mailto:notifications@github.com] Sent: Monday, June 16, 2014 8:50 PM To: OHDSI/Achilles Subject: Re: [Achilles] Sample Dataset in CDM v4 (#11)

No sample data yet. This should give you incentive to put your data into OMOP CDMv4 so you get to take advantage of all the cool tools OHDSI is pushing out...

Cheers,

Patrick

On Mon, Jun 16, 2014 at 8:08 PM, Mohammad Azimi notifications@github.com wrote:

Is there a sample dataset that is CDM v4 that I can use Achilles with? The OMOP website provides OSIM and OSIM2 but they both appear to be using legacy CDMs.

— Reply to this email directly or view it on GitHub https://github.com/OHDSI/Achilles/issues/11.

— Reply to this email directly or view it on GitHub https://github.com/OHDSI/Achilles/issues/11#issuecomment-46255900 .Image removed by sender.

mazimi commented 10 years ago

In the meantime, the Harvest project has published ETL scripts for OSIM2 to CDM v4: https://github.com/cbmi/omop_harvest/tree/master/etl