When maintainConnection is TRUE it makes a copy of the andromeda object when saving. This copy is not made into the andromedaTempFolder but rather the regular Rtmp folder. This is causing me issues on a system where I have a relatively small C drive for the operating system and a bigger one for the data and I'm extracting huge cohorts and specifying the andromedaTemp folder on the big drive.
I believe it should be very simple to fix. Add tempdir= .getAndromedaTempFolder() to all calls to tempfile in saveAndromeda function.
When
maintainConnectionisTRUEit makes a copy of the andromeda object when saving. This copy is not made into the andromedaTempFolder but rather the regular Rtmp folder. This is causing me issues on a system where I have a relatively small C drive for the operating system and a bigger one for the data and I'm extracting huge cohorts and specifying theandromedaTempfolder on the big drive.I believe it should be very simple to fix. Add
tempdir= .getAndromedaTempFolder()to all calls totempfilein saveAndromeda function.I'm happy to make a PR for this.