jmbanda
commented
3 years ago Greetings, please use the install instructions provided in the read.me file.
On Sun, Sep 27, 2020, 11:25 PM Ak784 notifications@github.com wrote:
Hello Everyone,
I am trying to install the APHRODITE package. Though it was working fine a few months back I guess there is some issue now.
I don't think this is an R issue when I don't see the package in available packages under OHDSI repository.
May I know why is this happening and am I making any mistake?
I got the below error
install.packages("Aphrodite")
Installing package into ‘C:/Users/aks/Documents/R/win-library/3.6’
(as ‘lib’ is unspecified)
Warning in install.packages :
package ‘Aphrodite’ is not available (for R version 3.6.2)
Warning in install.packages :
unable to access index for repository https://OHDSI.github.io/drat/bin/windows/contrib/3.6:
cannot open URL 'https://OHDSI.github.io/drat/bin/windows/contrib/3.6/PACKAGES'
While debugging, I found the below and would like to know why APHRODITE is not listed in the packages from OHDSI repository.
setRepositories() # I select 9 from the below
1: + CRAN
2: BioC software
3: BioC annotation
4: BioC experiment
5: CRAN (extras)
6: Omegahat
7: R-Forge
8: rforge.net
9: + OHDSI
When I do the available.packages(), I get the below output.
Achilles "Achilles" "1.4" NA
AlendronateVsRaloxifene "AlendronateVsRaloxifene" "0.2.1" NA
Andromeda "Andromeda" "0.3.2" NA
aws.s3 "aws.s3" "0.1.27" NA
BigKnn "BigKnn" "1.0.0" NA
BoostCompiledLibraries "BoostCompiledLibraries" "1.58.0-1" NA
BrokenAdaptiveRidge "BrokenAdaptiveRidge" "0.2.0" NA
CaseControl "CaseControl" "3.0.0" NA
CaseCrossover "CaseCrossover" "3.0.0" NA
Centaur "Centaur" "1.0.0" NA
CohortDiagnostics "CohortDiagnostics" "1.2.2" NA
CohortMethod "CohortMethod" "4.0.0" NA
Cyclops "Cyclops" "3.0.0" NA
DatabaseConnector "DatabaseConnector" "3.0.0" NA
EmpiricalCalibration "EmpiricalCalibration" "2.0.2" NA
Eunomia "Eunomia" "1.0.0" NA
EvidenceSynthesis "EvidenceSynthesis" "0.0.5" NA
FeatureExtraction "FeatureExtraction" "3.1.0" NA
Hydra "Hydra" "0.1.0" NA
IcTemporalPatternDiscovery "IcTemporalPatternDiscovery" "1.1.1" NA
KeppraAngioedema "KeppraAngioedema" "0.1.4" NA
MethodEvaluation "MethodEvaluation" "2.0.0" NA
NoacStudy "NoacStudy" "0.1" NA
OhdsiRTools "OhdsiRTools" "1.9.0" NA
OhdsiSharing "OhdsiSharing" "0.2.2" NA
ParallelLogger "ParallelLogger" "2.0.0" NA
PatientLevelPrediction "PatientLevelPrediction" "4.0.5" NA
PheValuator "PheValuator" "2.0.10" NA
RcppBoostCompute "RcppBoostCompute" "0.1" NA
ROhdsiWebApi "ROhdsiWebApi" "1.1.2" NA
SelfControlledCaseSeries "SelfControlledCaseSeries" "2.0.0" NA
SelfControlledCohort "SelfControlledCohort" "1.5.0" NA
SqlRender "SqlRender" "1.6.8" NA
xml2 "xml2" "1.0.0.9000" NA
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Hello Everyone,
I am trying to install the APHRODITE package. Though it was working fine a few months back I guess there is some issue now.
I understand that below error is a common R issue but why don't I see the package in
available packagesunderOHDSI repository.May I know why is this happening and am I making any mistake?
I got the below error
While debugging, I found the below and would like to know why
APHRODITEis not listed in the packages fromOHDSIrepository.When I do the
available.packages(), I get the below output.