OHDSI / Covid-19

The OHDSI repository to provide comprehensive evidence for the covid-19
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New vocabulary for novel concepts #7

Closed chandryou closed 4 years ago

chandryou commented 4 years ago

We need the new vocabulary for novel concepts including 'RT-PCR test for SARS-CoV-2' and 'COVID', and mapping table between EDI and standard OMOP vocabulary for them.

vojtechhuser commented 4 years ago

LOINC created such code. I posted on LOINC forum a coment about it but it is under moderation. (my guess is they will not approve the post). E.g., temp code don't display what is the LP code for 'SARS-CoV-2 RNA' (for example)

chandryou commented 4 years ago

I uploaded novel vocabulary of Korea for COVID-19 to the wiki

Needs mapping to the standard vocabulary

dimshitc commented 4 years ago

SNOMED was updated with new COVID concepts added, please see here: https://forums.ohdsi.org/t/ohdsi-virtual-study-a-thon-to-support-covid-19-response-to-take-place-26-29mar2020-collaborators-wanted/9810/20

ICDs and LOINC updates are coming soon

chandryou commented 4 years ago

@dimshitc @cgreich @Alexdavv Will you add more? Or can we close this issue? I'd like to update the vocab in our dataset once it's done.

Alexdavv commented 4 years ago

@dimshitc @cgreich @Alexdavv Will you add more? Or can we close this issue? I'd like to update the vocab in our dataset once it's done.

Right, we're adding some more. Will publish a special announcement on release.

chandryou commented 4 years ago

Right, we're adding some more. Will publish a special announcement on release.

@Alexdavv Could you tell me a timeline for that? I need this information for preparing study-a-thon.

Alexdavv commented 4 years ago

Right, we're adding some more. Will publish a special announcement on release.

@Alexdavv Could you tell me a timeline for that? I need this information for preparing study-a-thon.

The plan is today.

Alexdavv commented 4 years ago

Here is a summary of new concepts added. So this issue might be closed.