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OHDSI / DeepPatientLevelPrediction

An R package for performing patient level prediction using deep learning in an observational database in the OMOP Common Data Model.
https://ohdsi.github.io/DeepPatientLevelPrediction
10 stars 4 forks source link

Version 2.0 #81

Closed egillax closed 1 year ago

egillax commented 1 year ago

New pytorch backend

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 98.98% and project coverage change: +0.05% :tada:

Comparison is base (2c88d3a) 99.53% compared to head (04c4871) 99.59%.

:exclamation: Current head 04c4871 differs from pull request most recent head 904e926. Consider uploading reports for the commit 904e926 to get more accurate results

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #81 +/- ## ========================================== + Coverage 99.53% 99.59% +0.05% ========================================== Files 7 9 +2 Lines 641 488 -153 ========================================== - Hits 638 486 -152 + Misses 3 2 -1 ``` | [Files Changed](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI) | Coverage Δ | | |---|---|---| | [R/DeepPatientLevelPrediction.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9EZWVwUGF0aWVudExldmVsUHJlZGljdGlvbi5S) | `0.00% <0.00%> (ø)` | | | [R/Dataset.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9EYXRhc2V0LlI=) | `100.00% <100.00%> (ø)` | | | [R/Estimator.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9Fc3RpbWF0b3IuUg==) | `100.00% <100.00%> (ø)` | | | [R/HelperFunctions.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9IZWxwZXJGdW5jdGlvbnMuUg==) | `100.00% <100.00%> (ø)` | | | [R/LRFinder.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9MUkZpbmRlci5S) | `100.00% <100.00%> (ø)` | | | [R/MLP.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9NTFAuUg==) | `100.00% <100.00%> (ø)` | | | [R/ResNet.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9SZXNOZXQuUg==) | `100.00% <100.00%> (ø)` | | | [R/TrainingCache-class.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9UcmFpbmluZ0NhY2hlLWNsYXNzLlI=) | `100.00% <100.00%> (ø)` | | | [R/Transformer.R](https://app.codecov.io/gh/OHDSI/DeepPatientLevelPrediction/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OHDSI#diff-Ui9UcmFuc2Zvcm1lci5S) | `100.00% <100.00%> (+5.55%)` | :arrow_up: |

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egillax commented 1 year ago

Closes #79 , #82 , #75 , #25, #31