OHDSI / FeatureExtraction

An R package for generating features (covariates) for a cohort using data in the Common Data Model.
http://ohdsi.github.io/FeatureExtraction/
61 stars 60 forks source link

Temporal annual distribution functionality #271

Open alex-odysseus opened 2 months ago

alex-odysseus commented 2 months ago

Supporting https://github.com/OHDSI/WebAPI/issues/2331 to enable temporal annual distribution extending the existing temporal functionality

Temporal annual distribution will be effective for Feature Analyses specified in newly added PrespecTemporalAnnualAnalysis.csv

The idea of the functionality is to extract an underlying year for a Covariate of interest so that it can be easily grouped by in Cohort Characterization result visualization in WebAPI / ATLAS

Minor refactoring using Stream and StreamSupport classes

Standard Java formatting applied in a few places (hopefully acceptable)

Referencing SqlRender 1.18.1 in pom.xml

Targeting feature for 3.7.0 (for an unknown reason there is still 3.5.1-SNAPSHOT in 'develop' pom.xml even though 3.6.0 has been officially released

alex-odysseus commented 2 months ago

@anthonysena Anthony, I can't assign reviewers, please do so

anthonysena commented 2 months ago

@alex-odysseus thanks for reviewing this with me on Atlas/WebAPI WG call. Here are some specific tasks from our discussion: