OHDSI / OncologyWG

Oncology Working Group Repository
https://ohdsi.github.io/OncologyWG
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For each grade coding system: mapped or standard #551

Closed rtmill closed 3 months ago

rtmill commented 10 months ago

Which grading systems to persist as standard concepts? What criteria do we we use to determine?

Officially Requested: Add FNCLCC grade 1, 2 and 3 ? (Exists twice in Cancer Modifier - all non-standard)

Should we standardize others as well?

rtmill commented 10 months ago

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Grading System | Exists in vocabs? | Vocab | Standard? | codes | Focus | Comment -- | -- | -- | -- | -- | -- | -- (General Cancer Modifier Grade) | Y | CM | Y | 1,2,3,4,L, I, H |   | No hierarchy between them Gleason scoring system for malignant neoplasm of prostate | Y | CM | Y |   | Prostate | Gleason includes: score, grade group, primary pattern grade, seconday pattern grade, tertiary pattern grade Pathological Gleason | Y |   | Y |   | Prostate |   College of American Pathologist tumor grading system | N | - | - | - |   |   ISUP Pathology histological group | Y | **SNOMED** | **Y** |   |   |   Nottingham Grade | Y | CM | Y | 1,2,3 | Breast cancer |   Nottingham Score | Y | CM | Y | 3,4,5,6,7,8,9 | Breast cancer |   Nottingham mitotic score | Y | CM | Y | 1,2,3 | Breast cancer |   Nottingham nuclear score | Y | CM | Y | 1,2,3 | Breast cancer |   Nottingham tubular score | Y | CM | Y | 1,2,3 | Breast cancer |   WHO CNS tumor grading system | Y | CM | **N** | 1,2,3,4 | CNS |   Thal phase staging of amyloid plaques |   |   |   |   |   |   World Health Organization/International Society of Urological Pathology grading system for urothelial neoplasm | Y | CM | N | 1,2,3,4,X,High,Low |   |   **French Federation of Cancer Centers Sarcoma Group (FNCLCC) grading system** | Y | CM | **N** | 1,2, 3 |   | exists twice in CM, neither standard International Society of Urologic Pathology prostate cancer staging system | Class only | SNOMED | Y |   | Prostate |   Fuhrman nuclear grading system | Y | CM | Y | 1,2,3,4 | Kidney | Also in SNOMED

rtmill commented 3 months ago

Resolved.

See: #552, #553