Create functionality for ingesting new concepts

OHDSI / OncologyWG

Oncology Working Group Repository

https://ohdsi.github.io/OncologyWG

Apache License 2.0

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Create functionality for ingesting new concepts #575

Closed kzollove closed 1 year ago

kzollove commented 1 year ago

Inputs:

concept.csv
concept_relationship.csv

Augments concept and concept_relationship tables in an existing OMOP vocabulary on a supported OHDSI database (or just postgres?) Generates concept_ancestor and augments that table

Utilize generic_update

kzollove commented 1 year ago

Existing concepts are deleted as new ones are added. If concept with concept_id= 123 is being added, existing concept with concept_id=123 is deleted.