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OHDSI / OncologyWG

Oncology Working Group Repository
https://ohdsi.github.io/OncologyWG
Apache License 2.0
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Grade: Map LOINC to Cancer Modifier #621

Closed kzollove closed 11 months ago

kzollove commented 11 months ago

Destandardize and map to Cancer modifier:

grade_LOINC.csv

kzollove commented 11 months ago

These terms were destandardized but left unmapped:

<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:x="urn:schemas-microsoft-com:office:excel" xmlns="http://www.w3.org/TR/REC-html40">

concept_id | concept_name -- | -- 3019275 | Grade Cancer 45881582 | Grade/differentiation unknown, not stated, or not applicable 45884263 | Code - not defined in code system 45876292 | NK (natural killer) cell 45878362 | Null cell 40762604 | Grade pathology value Cancer 36210138 | Complete response (Grade 0 - No viable cancer cells) 3031227 | Grade ICD-O-1 Cancer 40762603 | Grade pathology system Cancer 1616648 | Histologic grade in Endometrial cancer specimen Qualitative 3046328 | Histology grade [Identifier] in Cancer specimen 40769833 | Histopathologic grade for primary colorectal cancer [PhenX] 40769829 | ICD-O-2 cancer classification - grade [PhenX] 36660206 | Prostate cancer grade group [Score] in Prostate tumor Qualitative 36660173 | Prostate cancer grade group basis [Type] in Prostate tumor

kzollove commented 11 months ago

concept_relationship_LOINCtoCM_grade.csv concept_LOINCtoCM_grade.csv